bioframe

Guide

  • Quickstart
  • Genomic interval operations
  • Reading genomic dataframes
  • Performance
  • How do I
  • Definitions
  • Specifications
  • Bioframe for bedtools users

Tutorials

  • How to: assign TF Motifs to ChIP-seq peaks
  • How to: assign ChIP-seq peaks to genes

API

  • Construction
  • Validation
  • Interval operations
  • File I/O
  • Resources
  • Additional tools
  • Plotting
  • Low-level API
bioframe
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